2024

Overexpression of the ribosome-inactivating protein OsRIP1 modulates the jasmonate signaling pathway in rice
S. Chen, N. De Zutter, A. Meijer, K. Gistelinck, P. Wytynck, I. Verbeke, V. Da Silva Osterne, S. Kondeti, T. De Meyer, K. Audenaert and E. Van Damme
(2024) FRONTIERS IN PLANT SCIENCE, 15, 1385477

The phenylalanine ammonia-lyase inhibitor AIP induces rice defence against the root-knot nematode Meloidogyne graminicola
J. Liu, H. Lefevere, L. Coussement, I. Delaere, T. De Meyer, K. Demeestere, M. Höfte, J. Gershenzon, C. Ullah and G. Gheysen
(2024) MOLECULAR PLANT PATHOLOGY, 25, e13424

Concurrent invasions of European starlings in Australia and North America reveal population-specific differentiation in shared genomic regions
N. Hofmeister, K. Stuart, W. Warren, S. Werner, M. Bateson, G. Ball, K. Buchanan, D. Burt, A. Cardilini, P. Cassey, T. De Meyer, J. George, S. Meddle, H. Rowland, C. Sherman, W. Sherwin, W. Vanden Berghe, L. Rollins and D. Clayton
(2024) MOLECULAR ECOLOGY, 0,

Characterization of loss-of-imprinting in breast cancer at the cellular level by integrating single-cell full-length transcriptome with bulk RNA-seq data
M. Amin, L. Coussement and T. De Meyer
(2024) BIOMOLECULES, 14, 1598

Loss-of-imprinting of HM13 leads to poor prognosis in clear cell renal cell carcinoma
F. Voorthuijzen, C. Stroobandt, W. Van Criekinge, T. Goovaerts and T. De Meyer
(2024) BIOMOLECULES, 14, 936

2023

Liver transcriptomic and methylomic analyses identify transcriptional mitogen-activated protein kinase regulation in facultative hibernation of Syrian hamster
L. Coussement, M. Oosterhof, V. Guryev, V. Reitsema, J. Bruintjes, M. Goris, H. Bouma, T. De Meyer, M. Rots and R. Henning
(2023) PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 290, 20230368

Dicer-like 3a mediates intergenerational resistance against root-knot nematodes in rice via hormone responses
A. Meijer, M. Atighi Quchan Atigh, K. Demeestere, T. De Meyer, K. Vandepoele and T. Kyndt
(2023) PLANT PHYSIOLOGY, 193,

Diproline-induced resistance to parasitic nematodes in the same and subsequent rice generations : roles of iron, nitric oxide and ethylene
J. De Kesel, E. Bonneure, M. Frei, T. De Meyer, S. Mangelinckx and T. Kyndt
(2023) FRONTIERS IN PLANT SCIENCE, 14, 1112007

Challenges in neoantigen-directed therapeutics
L. Lybaert, S. Lefever, B. Fant, E. Smits, B. De Geest, K. Breckpot, L. Dirix, S. Feldman, W. Van Criekinge, K. Thielemans, S. van der Burg, P. Ott and C. Bogaert
(2023) CANCER CELL, 41,

A urine-based genomic assay improves risk stratification for patients with high-risk hematuria stratified according to the American Urological Association guidelines
J. de Jong, O. Pijpers, K. van Kessel, J. Boormans, W. Van Criekinge, E. Zwarthoff and Y. Lotan
(2023) EUROPEAN UROLOGY ONCOLOGY, 6,