2014

A proteogenomics approach integrating proteomics and ribosome profiling increases the efficiency of protein identification and enables the discovery of alternative translation start sites
A. Koch, D. Fijalkowska, S. Steyaert, E. Ndah, J. Crappé, S. De Keulenaer, E. De Meester, M. Ma, B. Shen, K. Gevaert, W. Van Criekinge, P. Van Damme and G. Menschaert
(2014) PROTEOMICS, 14,

Strategies for validation and testing of DNA methylation biomarkers
C. Noehammer, W. Pulverer, M. Hassler, M. Hofner, M. Wielscher, K. Vierlinger, T. Liloglou, D. McCarthy, T. Jensen, A. Nygren, H. Gohlke, G. Trooskens, M. Braspenning, W. Van Criekinge, G. Egger and A. Weinhaeusel
(2014) EPIGENOMICS, 6,

Identification by array comparative genomic hybridization of a new amplicon on chromosome 17q highly recurrent in BRCA1 mutated triple negative breast cancer
S. Toffoli, I. Bar, F. Abdel-Sater, P. Delrée, P. Hilbert, F. Cavallin, F. Moreau, W. Van Criekinge, M. Lacroix-Triki, M. Campone, A. Martin, H. Roché, J. Machiels, J. Carrasco and J. Canon
(2014) BREAST CANCER RESEARCH, 16, 466

MEN1 Gene mutation and reduced expression are associated with poor prognosis in pulmonary carcinoids
D. Swarts, A. Scarpa, V. Corbo, W. Van Criekinge, M. van Engeland, G. Gatti, M. Henfling, M. Papotti, A. Perren, F. Ramaekers, E. Speel and M. Volante
(2014) JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 99,

Clinical validation of an epigenetic assay to predict negative histopathological results in repeat prostate biopsies
A. Partin, L. Van Neste, E. Klein, L. Marks, J. Gee, D. Troyer, K. Rieger-Christ, J. Jones, C. Magi-Galluzzi, L. Mangold, B. Trock, R. Lance, J. Bigley, W. Van Criekinge and J. Epstein
(2014) JOURNAL OF UROLOGY, 192,

Methylation-mediated repression of PRDM14 contributes to apoptosis evasion in HPV-positive cancers
S. Snellenberg, S. Cillessen, W. Van Criekinge, L. Bosch, C. Meijer, P. Snijders and R. Steenbergen
(2014) CARCINOGENESIS, 35,

Genome-wide methylation profiling reveals Zinc finger protein 516 (ZNF516) and FK-506binding protein 6 (FKBP6) promoters frequently methylated in cervical neoplasia, associated with HPV status and ethnicity in a Chilean population
P. Brebi, L. Maldonado, M. Noordhuis, C. Ili, P. Leal, P. Garcia, M. Brait, J. Ribas, C. Michailidi, J. Perez, E. Soudry, O. Tapia, P. Guzman, S. Muñoz, L. Van Neste, W. Van Criekinge, R. Irizarry, D. Sidransky, J. Roa and R. Guerrero-Preston
(2014) EPIGENETICS, 9,

Emerging evidence for CHFR as a cancer biomarker : from tumor biology to precision medicine
S. Derks, A. Cleven, V. Melotte, K. Smits, J. Brandes, N. Azad, W. Van Criekinge, A. de Bruïne, J. Herman and M. van Engeland
(2014) CANCER AND METASTASIS REVIEWS, 33,

Food-derived opioid peptides inhibit cysteine uptake with redox and epigenetic consequences
M. Trivedi, J. Shah, S. Al-Mughairy, N. Hodgson, B. Simms, G. Trooskens, W. Van Criekinge and R. Deth
(2014) JOURNAL OF NUTRITIONAL BIOCHEMISTRY, 25,

Systemic suppression of the shoot metabolism upon rice root nematode infection
T. Kyndt, S. Denil, L. Bauters, W. Van Criekinge and T. De Meyer
(2014) PLOS ONE, 9, e106858