Publications by Wim Van Criekinge.

2012

Molecular diagnostics for congenital hearing loss including 15 deafness genes using a next generation sequencing platform
S. De Keulenaer, J. Hellemans, S. Lefever, J. Renard, J. De Schrijver, H. Van de Voorde, M. Tabatabaiefar, F. Van Nieuwerburgh, D. Flamez, F. Pattyn, B. Scharlaken, D. Deforce, S. Bekaert, W. Van Criekinge, J. Vandesompele, G. Van Camp and P. Coucke
(2012) BMC MEDICAL GENOMICS, 5, 17

Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers.
A. Decock, M. Ongenaert, J. Hoebeeck, K. De Preter, G. Van Peer, W. Van Criekinge, R. Ladenstein, J. Schulte, R. Noguera, R. Stallings, A. Van Damme, G. Laureys, J. Vermeulen, T. Van Maerken, F. Speleman and J. Vandesompele
(2012) GENOME BIOLOGY, 13, R95

Transcriptome analysis of rice mature root tissue and root tips in early development by massive parallel sequencing
T. Kyndt, S. Denil, A. Haegeman, G. Trooskens, T. De Meyer, W. Van Criekinge and G. Gheysen
(2012) JOURNAL OF EXPERIMENTAL BOTANY, 63,

An omnibus consistent adaptive percentile modified Wilcoxon rank sum test with applications in gene expression studies
O. Thas, L. Clement, J. Rayner, B. Carvalho and W. Van Criekinge
(2012) BIOMETRICS, 68,

Low dose irradiation of thyroid cells reveals a unique transcriptomic and epigenetic signature in RET/PTC-positive cells
K. Abou-El-Ardat, P. Monsieurs, N. Anastasov, M. Atkinson, H. Derradji, T. De Meyer, S. Bekaert, W. Van Criekinge and S. Baatout
(2012) MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS, 731,

Spectral clustering in peptidomics studies allows homology searching and modification profiling: HomClus, a versatile tool
G. Menschaert, E. Hayakawa, L. Schoofs, W. Van Criekinge and G. Baggerman
(2012) JOURNAL OF PROTEOME RESEARCH, 11,

2011

Response to low-dose X-irradiation is p53-dependent in a papillary thyroid carcinoma model system
K. Abou-El-Ardat, H. Derradji, W. De Vos, T. De Meyer, S. Bekaert, W. Van Criekinge and S. Baatout
(2011) INTERNATIONAL JOURNAL OF ONCOLOGY, 39,

Practical tools to implement massive parallel pyrosequencing of PCR products in next generation molecular diagnostics
K. De Leeneer, J. De Schrijver, L. Clement, M. Baetens, S. Lefever, S. De Keulenaer, W. Van Criekinge, D. Deforce, F. Van Nieuwerburgh, S. Bekaert, F. Pattyn, B. De Wilde, P. Coucke, J. Vandesompele, K. Claes and J. Hellemans
(2011) PLOS ONE, 6, e25531

Massive parallel amplicon sequencing of the breast cancer genes BRCA1 and BRCA2: opportunities, challenges, and limitations
K. De Leeneer, J. Hellemans, J. De Schrijver, M. Baetens, B. Poppe, W. Van Criekinge, A. De Paepe, P. Coucke and K. Claes
(2011) HUMAN MUTATION, 32,

Applying massive parallel sequencing to molecular diagnosis of Marfan and Loeys-Dietz syndromes
M. Baetens, L. Van Laer, K. De Leeneer, J. Hellemans, J. De Schrijver, H. Van de Voorde, M. Renard, H. Dietz, R. Lacro, B. Menten, W. Van Criekinge, J. De Backer, A. De Paepe, B. Loeys and P. Coucke
(2011) HUMAN MUTATION, 32,