Publications by Wim Van Criekinge.

2023

Challenges in neoantigen-directed therapeutics
L. Lybaert, S. Lefever, B. Fant, E. Smits, B. De Geest, K. Breckpot, L. Dirix, S. Feldman, W. Van Criekinge, K. Thielemans, S. van der Burg, P. Ott and C. Bogaert
(2023) CANCER CELL, 41,

HIV-PULSE : a long-read sequencing assay for high-throughput near full-length HIV-1 proviral genome characterization
L. Lambrechts, N. Bonine, R. Verstraeten, M. Pardons, Y. Noppe, S. Rutsaert, F. Van Nieuwerburgh, W. Van Criekinge, B. Cole and L. Vandekerckhove
(2023) NUCLEIC ACIDS RESEARCH, 51,

2022

Haplotyping pharmacogenes using TLA combined with Illumina or Nanopore sequencing
L. Tilleman, K. Rubben, W. Van Criekinge, D. Deforce and F. Van Nieuwerburgh
(2022) SCIENTIFIC REPORTS, 12, 17734

Technical considerations in PCR-based assay design for diagnostic DNA methylation cancer biomarkers
M. Massen, K. Lommen, K. Wouters, J. Vandersmissen, W. Van Criekinge, J. Herman, V. Melotte, L. Schouten, M. van Engeland and K. Smits
(2022) CLINICAL EPIGENETICS, 14, 56

2021

Single cell epigenetic visualization assay
S. Kint, W. Van Criekinge, L. Vandekerckhove, W. De Vos, K. Bomsztyk, D. Krause and O. Denisenko
(2021) NUCLEIC ACIDS RESEARCH, 49, e43

Clinical use of the SelectMDx urinary-biomarker test with or without mpMRI in prostate cancer diagnosis : a prospective, multicenter study in biopsy-naive men
R. Hendriks, M. van der Leest, B. Israel, G. Hannink, A. YantiSetiasti, E. Cornel, C. Hulsbergen-van de Kaa, O. Klaver, J. Sedelaar, W. Van Criekinge, H. de Jong, P. Mulders, E. Crawford, J. Veltman, J. Schalken, J. Barentsz and I. van Oort
(2021) PROSTATE CANCER AND PROSTATIC DISEASES, 24,

DNA methylation regulates transcription factor-specific neurodevelopmental but not sexually dimorphic gene expression dynamics in zebra finch telencephalon
J. Diddens, L. Coussement, C. Frankl-Vilches, G. Majumdar, S. Steyaert, S. Ter Haar, J. Galle, E. De Meester, S. De Keulenaer, W. Van Criekinge, C. Cornil, J. Balthazart, A. Van der Linden, T. De Meyer and W. Vanden Berghe
(2021) FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 9, 583555

PhaLP : a database for the study of phage lytic proteins and their evolution
B. Criel, S. Taelman, W. Van Criekinge, M. Stock and Y. Briers
(2021) VIRUSES-BASEL, 13, 1240

Spectral prediction features as a solution for the search space size problem in proteogenomics
S. Verbruggen, S. Gessulat, R. Gabriels, A. Matsaroki, H. Van de Voorde, B. Kuster, S. Degroeve, L. Martens, W. Van Criekinge, M. Wilhelm and G. Menschaert
(2021) MOLECULAR & CELLULAR PROTEOMICS, 20, 100076

Evaluation of the new American Urological Association guidelines risk classification for hematuria
S. Woldu, C. Ng, R. Loo, J. Slezak, S. Jacobsen, W. Tan, J. Kelly, T. Lough, D. Darling, K. van Kessel, J. de Jong, W. Van Criekinge, S. Shariat, A. Hiar, S. Brown, S. Boorjian, D. Barocas, R. Svatek and Y. Lotan
(2021) JOURNAL OF UROLOGY, 205,