Publications by Wim Van Criekinge.

2015

We are all individuals...: bioinformatics in the personalized medicine era
L. Van Neste and W. Van Criekinge
(2015) CELLULAR ONCOLOGY, 38,

Forensic massively parallel sequencing data analysis tool: implementation of MyFLq as a standalone web- and Illumina BaseSpace®-application
C. Van Neste, Y. Gansemans, D. De Coninck, D. Van Hoofstat, W. Van Criekinge, D. Deforce and F. Van Nieuwerburgh
(2015) FORENSIC SCIENCE INTERNATIONAL-GENETICS, 15,

Mining for viral fragments in methylation enriched sequencing data
K. Mensaert, W. Van Criekinge, O. Thas, E. Schuuring, R. Steenbergen, G. Wisman and T. De Meyer
(2015) FRONTIERS IN GENETICS, 6, 16

2014

Bacterial diversity assessment in Antarctic terrestrial and aquatic microbial mats : a comparison between bidirectional pyrosequencing and cultivation
B. Tytgat, E. Verleyen, D. Obbels, K. Peeters, A. De Wever, S. D'hondt, T. De Meyer, W. Van Criekinge, W. Vyverman and A. Willems
(2014) PLOS ONE, 9, e97564

My-Forensic-Loci-queries (MyFLq) framework for analysis of forensic STR data generated by massive parallel sequencing
C. Van Neste, M. Vandewoestyne, W. Van Criekinge, D. Deforce and F. Van Nieuwerburgh
(2014) FORENSIC SCIENCE INTERNATIONAL-GENETICS, 9,

N-terminal proteomics and ribosome profiling provide a comprehensive view of the alternative translation initiation landscape in mice and men
P. Van Damme, D. Fijalkowska, W. Van Criekinge and G. Menschaert
(2014) MOLECULAR & CELLULAR PROTEOMICS, 13,

Next-generation technologies and data analytical approaches for epigenomics
K. Mensaert, S. Denil, G. Trooskens, W. Van Criekinge, O. Thas and T. De Meyer
(2014) ENVIRONMENTAL AND MOLECULAR MUTAGENESIS, 55,

Systemic suppression of the shoot metabolism upon rice root nematode infection
T. Kyndt, S. Denil, L. Bauters, W. Van Criekinge and T. De Meyer
(2014) PLOS ONE, 9, e106858

Food-derived opioid peptides inhibit cysteine uptake with redox and epigenetic consequences
M. Trivedi, J. Shah, S. Al-Mughairy, N. Hodgson, B. Simms, G. Trooskens, W. Van Criekinge and R. Deth
(2014) JOURNAL OF NUTRITIONAL BIOCHEMISTRY, 25,

Genome-wide methylation profiling reveals Zinc finger protein 516 (ZNF516) and FK-506binding protein 6 (FKBP6) promoters frequently methylated in cervical neoplasia, associated with HPV status and ethnicity in a Chilean population
P. Brebi, L. Maldonado, M. Noordhuis, C. Ili, P. Leal, P. Garcia, M. Brait, J. Ribas, C. Michailidi, J. Perez, E. Soudry, O. Tapia, P. Guzman, S. Muñoz, L. Van Neste, W. Van Criekinge, R. Irizarry, D. Sidransky, J. Roa and R. Guerrero-Preston
(2014) EPIGENETICS, 9,