Gerben Menschaert Publications

Colorado potato beetle (Coleoptera) gut transcriptome analysis: expression of RNA interference-related genes

L. Swevers, H. Huvenne, G. Menschaert, D. Kontogiannatos, A. Kourti, Y. Pauchet, R. Ffrench-Constant, G. Smagghe

INSECT MOLECULAR BIOLOGY · 22 · 668–684

Improving the identification rate of endogenous peptides using electron transfer dissociation and collision-induced dissociation

E. Hayakawa, G. Menschaert, P. De Bock, W. Luyten, K. Gevaert, G. Baggerman, L. Schoofs

JOURNAL OF PROTEOME RESEARCH · 12 · 5410–5421

Combining in silico prediction and ribosome profiling in a genome-wide search for novel putatively coding sORFs

J. Crappé, W. Van Criekinge, G. Trooskens, E. Hayakawa, W. Luyten, G. Baggerman, G. Menschaert

BMC GENOMICS · 14 · 648

PIUS: peptide identification by unbiased search

E. Costa, G. Menschaert, W. Luyten, K. De Grave, J. Ramon

BIOINFORMATICS · 29 · 1913–1914

Deep proteome coverage based on ribosome profiling aids mass spectrometry-based protein and peptide discovery and provides evidence of alternative translation products and near-cognate translation initiation events

G. Menschaert, W. Van Criekinge, T. Notelaers, A. Koch, J. Crappé, K. Gevaert, P. Van Damme

MOLECULAR & CELLULAR PROTEOMICS · 12 · 1780–1790

Quality evaluation of methyl binding domain based kits for enrichment DNA-methylation sequencing

T. De Meyer, E. Mampaey, M. Vlemmix, S. Denil, G. Trooskens, J. Renard, S. De Keulenaer, P. Dehan, G. Menschaert, W. Van Criekinge

PLOS ONE · 8 · e59068